pFind Studio: a computational solution for mass spectrometry-based proteomics

Introduction

pLink® 2 is developed as an upgrade of pLink 1. Compared with pLink 1, pLink 2 provides a graphical user interface, and is ~40 times faster with a newly designed index structure. There are also some improvements in the precision.

Our paper A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides has been published by Nature Communications. Congratulations and please cite this paper if you used pLink 2.




Cite us

A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides.
Zhen-Lin Chen, Jia-Ming Meng, Yong Cao, Ji-Li Yin, Run-Qian Fang, Sheng-Bo Fan, Chao Liu, Wen-Feng Zeng, Yue-He Ding, Dan Tan, Long Wu, Wen-Jing Zhou, Hao Chi, Rui-Xiang Sun, Meng-Qiu Dong & Si-Min He.

Nature Communications. July 30, 2019. [abstract]





Downloads

Please download and read user_guide.pdf before download and use pLink 2.

pLink 2 is currently free to use. Download pLink 2.3.

If you have any questions about it, please contact pLink@ict.ac.cn.

Online discussion: https://github.com/pFindStudio/pLink2/issues, see github.pdf for usage.

If you have problem to run pLink 2.3.9 on Windows 7, please see this issue.





Version history

Release version Release date Download Click for more
pLink 2.3.9 2020-01-07 Site1    Site2 Release Notes
pLink 2.3.8 2019-12-27 Site1    Site2 Release Notes
pLink 2.3.7 2019-11-05 Site1    Site2 Release Notes
pLink 2.3.6 2019-09-30 Site1    Site2 Release Notes
pLink 2.3.5 2018-12-29 Site1    Site2 Release Notes
pLink 2.3.4 2018-09-05 Download Release Notes
pLink 2.3.3 2018-05-30 Download Release Notes
pLink 2.3.2 2018-04-04 Download Release Notes
pLink 2.3.1 2018-02-09 Download Release Notes
pLink 2.3.0 2018-01-31 Download Release Notes
pLink 2.2.1649 2017-12-30 Download Release Notes
pLink 1.23 2015-08-31 Download Release Notes